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CLASSIFICATION OF PROTEIN STRUCTURES
The hyperlinks beside each PDB code
are for the chemical-MIME version of the file, from five different PDB servers
on the WWW. Key to hyperlinks
Explanatory Key & Acknowledgement
1 zinc finger - CCHC-type
1ncp [Bbk|BNL|ExP|Waw|Hal] 1 N 17 N Nucleocapsid protein P2 (N-terminal domain) HIV-1 1ncp [Bbk|BNL|ExP|Waw|Hal] 22 C 39 C Nucleocapsid protein P2 (C-terminal domain) HIV-12 zinc finger - CCHH-type
5znf [Bbk|BNL|ExP|Waw|Hal] 1 30 zinc-finger (ZFY-6T)Homo sapiens 3znf [Bbk|BNL|ExP|Waw|Hal] 1 30 zinc-finger (enhancer binding protein)Homo sapiens 1ard [Bbk|BNL|ExP|Waw|Hal] 102 130 zinc-finger (transcription factor ADR1)Saccharomyces cerevisiae 1bbo [Bbk|BNL|ExP|Waw|Hal] 1 27 zinc-finger (enhancer binding protein)Homo sapiens 2.20 15.20 1znf [Bbk|BNL|ExP|Waw|Hal] 1 25 zinc-finger (XFIN, 31st domain) Xenopus laevis 1zaa [Bbk|BNL|ExP|Waw|Hal] 34 C 61 C zinc-finger (ZIF268, domain 2)Mus musculus 2.10 18.20 1zaa [Bbk|BNL|ExP|Waw|Hal] 62 C 87 C zinc-finger (ZIF268, domain 3)Mus musculus 2.10 18.20 1zaa [Bbk|BNL|ExP|Waw|Hal] 3 C 33 C zinc-finger (ZIF268, domain 1)Mus musculus 2.10 18.203 metallothionein - beta-domain
2mhu [Bbk|BNL|ExP|Waw|Hal] 1 30 metallothionein (beta domain)Homo sapiens 2mrb [Bbk|BNL|ExP|Waw|Hal] 1 30 metallothionein (beta domain)Oryctolagus cuniculus 2mrt [Bbk|BNL|ExP|Waw|Hal] 1 30 metallothionein (beta domain)Rattus rattus 4 metallothionein - alpha-domain
1mrb [Bbk|BNL|ExP|Waw|Hal] 31 61 metallothionein (alpha domain)Oryctolagus cuniculus 1mrt [Bbk|BNL|ExP|Waw|Hal] 31 61 metallothionein (alpha domain)Rattus rattus 1mhu [Bbk|BNL|ExP|Waw|Hal] 31 61 metallothionein (alpha domain)Homo sapiens 5 E3-binding domain
1bbl [Bbk|BNL|ExP|Waw|Hal] 12 48 E3-binding domainEscherichia coli 1pde [Bbk|BNL|ExP|Waw|Hal] 7 39 E3-binding domainBacillus stearothermophilus 6 pancreatic hormone
1bba [Bbk|BNL|ExP|Waw|Hal] 1 36 pancreatic polypeptideBos taurus 1ppt [Bbk|BNL|ExP|Waw|Hal] 1 36 avian pancreatic polypeptideMeleagris gallopavo 1.40 17.807 rubredoxin
6rxn [Bbk|BNL|ExP|Waw|Hal] 1 52 rubredoxinDesulfovibrio desulfuricans 1.50 9.30 1rdg [Bbk|BNL|ExP|Waw|Hal] 1 52 rubredoxinDesulfovibrio gigas 1.40 13.60 7rxn [Bbk|BNL|ExP|Waw|Hal] 1 52 rubredoxinDesulfovibrio vulgaris 1.50 9.80 4rxn [Bbk|BNL|ExP|Waw|Hal] 1 54 rubredoxinClostridium pasteurianum 1.20 12.80 1zrp [Bbk|BNL|ExP|Waw|Hal] 1 53 rubredoxinPyrococcus furiosus 8 serine proteinase inhibitor - potato I-type
2ci2 [Bbk|BNL|ExP|Waw|Hal] 19 I 83 I barley seed chymotrypsin inhibitorHordeum vulgare 2.00 19.80 1cse [Bbk|BNL|ExP|Waw|Hal] 8 I 70 I eglinHirudo medicinalis 1.20 17.809 SH3 domain
1hsp [Bbk|BNL|ExP|Waw|Hal] 1 71 Phospholipase C\(*g SH3 domainHomo sapiens 1shf [Bbk|BNL|ExP|Waw|Hal] 84 A 142 A FYN SH3 domain Homo sapiens 1.90 18.0 1shg [Bbk|BNL|ExP|Waw|Hal] 6 62 alpha spectrin Gallus gallus 1.80 19.5 1pnj [Bbk|BNL|ExP|Waw|Hal] 1A 84 p85-alpha subunit SH3 domain Bos taurus10 ferredoxin (4Fe-4S)
4fd1 [Bbk|BNL|ExP|Waw|Hal] 1 106 ferredoxin Azotobacter vinelandii 1.90 21.20 1fdx [Bbk|BNL|ExP|Waw|Hal] 1 54 ferredoxin Peptococcus aerogenes 2.00 20.60 1fxd [Bbk|BNL|ExP|Waw|Hal] 1 58 ferredoxin II Desulfovibrio gigas 1.70 15.7011 high potential iron protein
1isu [Bbk|BNL|ExP|Waw|Hal] 1 62 high potential iron protein Rhodocyclus tenius 1.50 17.30 2hip [Bbk|BNL|ExP|Waw|Hal] 1 A 71 A high potential iron protein Oryctolagus cuniculus 2.50 18.40 1hpi [Bbk|BNL|ExP|Waw|Hal] 1 71 high potential iron protein Ectothiorhodospira vacuolata 1.80 16.30 1hip [Bbk|BNL|ExP|Waw|Hal] 1 85 high potential iron protein Chromatium vinosum 2.00 24.0012 ferredoxin (2Fe-2S)
1fxi [Bbk|BNL|ExP|Waw|Hal] 1 A 96 A ferredoxin Aphanothece sacrum 2.20 23.00 3fxc [Bbk|BNL|ExP|Waw|Hal] 1 98 ferredoxin Spirulina platensis 2.50 31.00 1fxa [Bbk|BNL|ExP|Waw|Hal] 1 A 98 A ferredoxin Anabaena 7120 2.50 18.70 1frd [Bbk|BNL|ExP|Waw|Hal] 1 98 ferredoxin Cyanobacterium anabena 1.70 16.70
Small - disulphide
13 serine proteinase inhibitor - squash-type
2eti [Bbk|BNL|ExP|Waw|Hal] 1 28 trypsin inhibitor Ecballium elaterium 1cti [Bbk|BNL|ExP|Waw|Hal] 1 29 trypsin inhibitor Cucurbita maxima 1mct [Bbk|BNL|ExP|Waw|Hal]I I I trypsin inhibitor Momordica charantia 1.60 16.7014 sea anemone toxin
1bds [Bbk|BNL|ExP|Waw|Hal] 1 43 anti-hypertensive protein BDS-1 Anemonia sulcata 1sh1 [Bbk|BNL|ExP|Waw|Hal] 1 48 neurotoxin 1 Stichodactyla helianthus15 EGF-like domain
1ixa [Bbk|BNL|ExP|Waw|Hal] 46 84 EGF-like module factor IX Homo sapiens 1esl [Bbk|BNL|ExP|Waw|Hal] 121 157 EGF-like domain E-selectin Homo sapiens 2.00 16.40 1apo [Bbk|BNL|ExP|Waw|Hal] 45 86 EGF-like module factor X Bos taurus 1epi [Bbk|BNL|ExP|Waw|Hal] 1 53 epidermal growth factor Mus musculus 4tgf [Bbk|BNL|ExP|Waw|Hal] 1 50 transforming growth factor alpha Homo sapiens 1hre [Bbk|BNL|ExP|Waw|Hal] 1 EGF-like domain heregulin-alpha Homo sapiens16 insulin
4ins [Bbk|BNL|ExP|Waw|Hal] 1 A 30 B insulin Sus scrofa 1.50 15.30 2ins [Bbk|BNL|ExP|Waw|Hal] 1 A 30 B insulin Bos taurus 2.50 18.00 6rlx [Bbk|BNL|ExP|Waw|Hal] -2 A 24 B relaxin Homo sapiens 1.50 18.70 2gf1 [Bbk|BNL|ExP|Waw|Hal] 1 70 insulin-like growth factor 1 Homo sapiens17 serine proteinase inhibitor - Bowman-Birk-type
1tab [Bbk|BNL|ExP|Waw|Hal] 12 I 73 I Bowman-Birk inhibitor AB-I Phaseolus angularis 2.30 20.00 1bbi [Bbk|BNL|ExP|Waw|Hal] 1 71 chymotrypsin Bowman-Birk inhibitor Glycine max 1pi2 [Bbk|BNL|ExP|Waw|Hal] 3 63 Bowman-Birk inhibitor PI-II Glycine max 2.50 23.6018 serine proteinase inhibitor - Kazal-type
1ovo [Bbk|BNL|ExP|Waw|Hal] 1 A 56 A third domain ovomucoid inhibitor Coturnix coturnix Japonica 1.90 20.00 2ovo [Bbk|BNL|ExP|Waw|Hal] 1 56 third domain ovomucoid inhibitor Lophura nycthemera 1.50 19.90 2bus [Bbk|BNL|ExP|Waw|Hal] 2 57 seminal plasma proteinase inhibitor IIA Bos taurus 1tgs [Bbk|BNL|ExP|Waw|Hal] 1 I 56 I pancreatic secretory trypsin inhibitor Sus scrofa 1.80 18.60 1cgi [Bbk|BNL|ExP|Waw|Hal] 1 I 56 I pancreatic secretory trypsin inhibitor Homo sapiens 2.30 19.50 1pce [Bbk|BNL|ExP|Waw|Hal] 1 60 PEC-60 Sus scrofa19 serine proteinase inhibitor - Kunitz-type
1dtk [Bbk|BNL|ExP|Waw|Hal] 1 57 dendrotoxin K Dendroaspis polylepis polylepis 1dem [Bbk|BNL|ExP|Waw|Hal] 1 60 dendrotoxin I Dendroaspis polylepis polylepis 1dtx [Bbk|BNL|ExP|Waw|Hal] 2 59 alpha-dendrotoxin Dendroaspis angusticeps 2.20 16.90 5pti [Bbk|BNL|ExP|Waw|Hal] 1 58 pancreatic polypeptide inhibitor Bos taurus 1.00 20.00 1aap [Bbk|BNL|ExP|Waw|Hal] 1 A 56 A Alzheimer's amyloid B-protein precursor Homo sapiens 1.50 17.70 1shp [Bbk|BNL|ExP|Waw|Hal] 1 55 trypsin inhibitor Stichodactyla helianthus 1tap [Bbk|BNL|ExP|Waw|Hal] 1 60 factor Xa inhibitor Ornithodoros moubata20 C-module domain
1hfh [Bbk|BNL|ExP|Waw|Hal] 1 62 factor H 15th C-module domain Homo sapiens 1hfh [Bbk|BNL|ExP|Waw|Hal] 63 120 factor H 16th C-module domain Homo sapiens21 snake toxin
2ctx [Bbk|BNL|ExP|Waw|Hal] 1 71 alpha-cobratoxin Naja naja Siamensis 2.40 19.50 2abx [Bbk|BNL|ExP|Waw|Hal] 1 A 74 A alpha-bungarotoxin Bungarus multicinctus 2.50 24.00 1nbt [Bbk|BNL|ExP|Waw|Hal] 1 A 66 A neuronal bungarotoxin Bungarus multicinctus 1fas [Bbk|BNL|ExP|Waw|Hal] 1 61 fasciculin 1 Dendroaspis angusticeps 1.80 14.90 1nea [Bbk|BNL|ExP|Waw|Hal] 1 61 alpha-toxin Naja nigricollis 1nor [Bbk|BNL|ExP|Waw|Hal] 1 61 neurotoxin II Naja naja oxiana 1ntx [Bbk|BNL|ExP|Waw|Hal] 1 62 alpha-neurotoxin Dendroapsis polylepsis polylepsis 1nxb [Bbk|BNL|ExP|Waw|Hal] 1 62 erabutoxin Laticauda semifasciata 1.38 24.00 1tgx [Bbk|BNL|ExP|Waw|Hal] 1 A 60 A \(*g toxin Naja nigricolis 1.55 17.20 1cdt [Bbk|BNL|ExP|Waw|Hal] 1 A 60 A cardiotoxin V4 Naja mossambica mossambica 2.50 19.7022 kringle domain
1pkr [Bbk|BNL|ExP|Waw|Hal] 0 80 plasminogen kringle 1 Homo sapiens 2.48 15.90 1pk4 [Bbk|BNL|ExP|Waw|Hal] 0 80 plasminogen kringle 4 Homo sapiens 1.90 14.20 1tpk [Bbk|BNL|ExP|Waw|Hal] -3 A 82 A tissue-type plasminogen activator kringle Homo sapiens 2.40 18.40 1kdu [Bbk|BNL|ExP|Waw|Hal] -1 82 urinary plasminogen activator kringle Homo sapiens 2pf1 [Bbk|BNL|ExP|Waw|Hal] 64 156 thrombin kringle 1 Bos taurus 2.20 17.50
All alpha
23 DNA-binding homeodomain
1hdd [Bbk|BNL|ExP|Waw|Hal] 3 C 59 C engrailed homeodomain Drosophila melanogaster 2.80 22.50 1hom [Bbk|BNL|ExP|Waw|Hal] 0 67 antennapedia homeodomain Drosophila melanogaster24 DNA-binding repressor
2cro [Bbk|BNL|ExP|Waw|Hal] -1 63 cro repressor phage 434 2.30 19.50 1r69 [Bbk|BNL|ExP|Waw|Hal] 1 63 repressor phage 434 2.00 19.30 1lrd [Bbk|BNL|ExP|Waw|Hal] 6 3 92 3 lambda repressor bacteriophage l 2.50 24.2025 steroid-binding protein
2utg [Bbk|BNL|ExP|Waw|Hal] 1 A 70 A uteroglobin Oryctolagus cuniculus 1.60 19.00 1ccd [Bbk|BNL|ExP|Waw|Hal] -2 75 Clara cell 17kDa protein Rattus rattus 3.00 22.5026 cytochrome-c5
1cor [Bbk|BNL|ExP|Waw|Hal] 2 82 cytochrome-c551 Pseudomonas stutzeri 351c [Bbk|BNL|ExP|Waw|Hal] 1 82 cytochrome-c551 Pseudomonas aeruginosa 1.60 19.50 1cc5 [Bbk|BNL|ExP|Waw|Hal] 5 87 cytochrome-c5 Azotobacter vinelandii 2.50 29.0027 cytochrome-b
3b5c [Bbk|BNL|ExP|Waw|Hal] 3 87 cytochrome b5 Escherichia coli 1.40 16.40 1fcb [Bbk|BNL|ExP|Waw|Hal] 1 A 92 A flavocytochrome b2 Saccharomyces cerevisiae 2.40 18.8028 calcium-binding protein - parvalbumin-like
5pal [Bbk|BNL|ExP|Waw|Hal] 1 109 parvalbumin Triakis semifasciata 1.50 17.30 5cpv [Bbk|BNL|ExP|Waw|Hal] 1 108 parvalbumin Cyprinus carpio 1.60 18.70 1omd [Bbk|BNL|ExP|Waw|Hal] 2 108 oncomodulin Rattus norvegicus 1.90 16.60 1pal [Bbk|BNL|ExP|Waw|Hal] 1 108 parvalbumin Esox lucius 1.70 19.7029 cytochrome-c
1cry [Bbk|BNL|ExP|Waw|Hal] 1 107 cytochrome-c2 Rhodopseudomonas viridis 3.00 21.90 2pcb [Bbk|BNL|ExP|Waw|Hal]B 1 104 cytochrome-c Equus caballus 2.80 22.20 1yea [Bbk|BNL|ExP|Waw|Hal] -9 103 cytochrome-c isozyme 2 Saccharomyces cerevisiae 1.90 19.00 1ycc [Bbk|BNL|ExP|Waw|Hal] -5 103 cytochrome-c isozyme 1 Saccharomyces cerevisiae 1.20 19.20 1ccr [Bbk|BNL|ExP|Waw|Hal] 1 111 cytochrome-c Oryza sativa 1.50 19.00 5cyt [Bbk|BNL|ExP|Waw|Hal] 1 R 103 R cytochrome-c Thunnus alalunga 1.50 15.90 2c2c [Bbk|BNL|ExP|Waw|Hal] 1 112 cytochrome-c2 Rhodospirillum rubrum 2.00 17.20 1c2r [Bbk|BNL|ExP|Waw|Hal] 1 A 116 A cytochrome-c2 Rhodobacter capsulatus 2.50 16.80 155c [Bbk|BNL|ExP|Waw|Hal] 1 121 cytochrome-c550 Paracoccus denitrificans 2.5030 cytochrome-c3
1cy3 [Bbk|BNL|ExP|Waw|Hal] 1 118 cytochrome c3 Desulfovibrio desulfuricans Norway 2.50 34.00 2cdv [Bbk|BNL|ExP|Waw|Hal] 1 107 cytochrome c3 Desulfovibrio vulgaris Miyazaki 1.80 17.6031 hemerythrin
2mhr [Bbk|BNL|ExP|Waw|Hal] 1 118 myohemerythrin Themiste zostericola 1.70 15.80 2hmq [Bbk|BNL|ExP|Waw|Hal] 1 A 113 A hemerythrin Themiste dyscritum 2.00 17.3032 phospholipase A2
1bp2 [Bbk|BNL|ExP|Waw|Hal] 1 123 phospholipase A2 Bos taurus 1.70 17.10 1p2p [Bbk|BNL|ExP|Waw|Hal] 1 124 phospholipase A2 Sus scrofa 2.60 24.10 1bbc [Bbk|BNL|ExP|Waw|Hal] 1 132 phospholipase A2 Homo sapiens 2.20 17.80 1pp2 [Bbk|BNL|ExP|Waw|Hal] 1 R 133 R phospholipase A2 Crotalus atrox 2.50 17.80 1ppa [Bbk|BNL|ExP|Waw|Hal] 1 133 phospholipase A2 Agkistridon piscivorus 2.00 15.70 1pob [Bbk|BNL|ExP|Waw|Hal] 1 A 118 A phospholipase A2 Naja naja atra 2.00 17.933 cytochrome-c'
2ccy [Bbk|BNL|ExP|Waw|Hal] 2 A 128 A cytochrome c' Rhodospirilium molischianum 1.70 18.80 1bbh [Bbk|BNL|ExP|Waw|Hal] 1 A 131 A cytochrome c' Chromatium vinosum 1.80 18.5034 globin
2mm1 [Bbk|BNL|ExP|Waw|Hal] 1 153 myoglobin Homo sapiens 2.80 15.80 1ymb [Bbk|BNL|ExP|Waw|Hal] 1 153 myoglobin Equus caballus 1.90 15.50 1pmb [Bbk|BNL|ExP|Waw|Hal] 1 A 153 A myoglobin Sus scrofa 2.50 18.50 1mbs [Bbk|BNL|ExP|Waw|Hal] 1 153 myoglobin Phoca vitulina 2.50 4mbn [Bbk|BNL|ExP|Waw|Hal] 1 153 myoglobin Physeter catodon 2.00 17.20 1myt [Bbk|BNL|ExP|Waw|Hal] 5 153 myoglobin Thunnus albacares 1.74 17.70 2hhb [Bbk|BNL|ExP|Waw|Hal] 1 A 141 A haemoglobin alpha-chain Homo sapiens 1.70 16.00 2mhb [Bbk|BNL|ExP|Waw|Hal] 1 A 141 A haemoglobin alpha-chain Equus caballus 1.70 23.00 1pbx [Bbk|BNL|ExP|Waw|Hal] 1 A 142 A haemoglobin Pagothenia bernacchii 2.50 17.80 2hhb [Bbk|BNL|ExP|Waw|Hal] 1 B 146 B haemoglobin beta-chain Homo sapiens 1.70 16.00 2mhb [Bbk|BNL|ExP|Waw|Hal] 1 B 146 B haemoglobin beta-chain Equus caballus 1.70 23.00 2lhb [Bbk|BNL|ExP|Waw|Hal] 1 149 haemoglobin Petromyzon marinus 2.00 14.20 1mba [Bbk|BNL|ExP|Waw|Hal] 1 146 myoglobin Aplysia liminacia 1.60 19.30 1sdh [Bbk|BNL|ExP|Waw|Hal] 1 A 146 A haemoglobin Scapharca inaequivalvis 2.40 15.60 1lh1 [Bbk|BNL|ExP|Waw|Hal] 1 153 leghaemoglobin Lupinus luteum 2.00 1hlb [Bbk|BNL|ExP|Waw|Hal] 1 157 haemoglobin Caudina arenicola 2.50 15.00 1ith [Bbk|BNL|ExP|Waw|Hal] 1 A 141 A haemoglobin Urechis caupo 2.50 14.70 1ecd [Bbk|BNL|ExP|Waw|Hal] 1 136 erythrocruorin Chironomous thummi thummi 1.40 19.00 2hbg [Bbk|BNL|ExP|Waw|Hal] 1 147 haemoglobin Glycera dibranchiata 1.50 12.7035 cytokine - granulocyte colony stimulating factor
1bgc [Bbk|BNL|ExP|Waw|Hal] 9 173 Granulocyte colony stimulating factor Bos taurus 1.70 21.30 1bgd [Bbk|BNL|ExP|Waw|Hal] 10 173 Granulocyte colony stimulating factor Canis familiaris 2.30 20.7 1rhg [Bbk|BNL|ExP|Waw|Hal] 9 A 172 A Granulocyte colony stimulating factor Homo sapiens 2.20 21.5036 calcium-binding protein - calmodulin-like
3cln [Bbk|BNL|ExP|Waw|Hal] 5 147 calmodulin Rattus rattus 2.20 17.50 4cln [Bbk|BNL|ExP|Waw|Hal] 1 148 calmodulin Drosophila melanogaster 2.20 19.70 5tnc [Bbk|BNL|ExP|Waw|Hal] 2 162 troponin C Meleagris gallopavo 2.00 15.50 2scp [Bbk|BNL|ExP|Waw|Hal] 1 A 174 A sarcoplasmic calcium-binding protein Nereis diversicolor 2.00 18.00 1sas [Bbk|BNL|ExP|Waw|Hal] 1 185 sarcoplasmic calcium binding protein Branchiostoma lanceolatum 2.40 19.0037 Fe/Mn superoxide dismutase
1abm [Bbk|BNL|ExP|Waw|Hal] 1 A 198 A manganese superoxide dismutase Homo sapiens 2.20 17.10 3sdp [Bbk|BNL|ExP|Waw|Hal] 5 A 190 A iron superoxide dismutase Pseudomonas ovalis 2.10 23.2038 glutathione S-transferase
1gss [Bbk|BNL|ExP|Waw|Hal] 1 A 207 A glutathione S-transferase Homo sapiens 2.80 19.60 1gsr [Bbk|BNL|ExP|Waw|Hal] 1 A 207 A glutathione S-transferase Sus scrofa 2.30 24.10 5gst [Bbk|BNL|ExP|Waw|Hal] 1 A 217 A glutathione S-transferase Rattus rattus 2.0 19.2 1guh [Bbk|BNL|ExP|Waw|Hal] 2 A 222 A glutathione S-transferase A1-1 Homo sapiens 2.60 22.939 annexin
1ala [Bbk|BNL|ExP|Waw|Hal] 3 318 annexin V Homo sapiens 2.30 18.40 1avh [Bbk|BNL|ExP|Waw|Hal] 3 A 320 A annexin V Gallus gallus 2.30 19.2040 peroxidase
1arp [Bbk|BNL|ExP|Waw|Hal] 9 344 peroxidase Arthromyces ramosus 1.90 17.40 1lga [Bbk|BNL|ExP|Waw|Hal] 1 A 343 A lignin peroxidase Phanerochaete chryosporium 2.03 15.00 2cyp [Bbk|BNL|ExP|Waw|Hal] 2 294 cytochrome c' peroxidase Saccharomyces cerevisiae 1.70 20.2041 cytochrome p450
2cpp [Bbk|BNL|ExP|Waw|Hal] 10 414 cytochrome p450CAM Pseudomonas putida 1.63 19.00 1cpt [Bbk|BNL|ExP|Waw|Hal] 1 428 cytochrome p450TERP Pseudomonas sp. 2.30 18.90 2hpd [Bbk|BNL|ExP|Waw|Hal] 1 A 457 A cytochrome p450BM3 Bacillus megaterium 2.0 16.70Membrane-bound all-alpha
42 photosynthetic reaction center
1prc [Bbk|BNL|ExP|Waw|Hal] 1 L 258 H photosynthetic reaction center Rhodopseudomonas viridis 2.30 19.30 4rcr [Bbk|BNL|ExP|Waw|Hal] 5 L 248 H photosynthetic reaction center Rhodobacter sphaeroides R-26 2.80 22.70
alpha+beta
43 protein G domain
1pgx [Bbk|BNL|ExP|Waw|Hal] 8 77 protein G domain B2 Streptococcus sp. 1.70 19.10 2gb1 [Bbk|BNL|ExP|Waw|Hal] 1 56 protein G domain B1 Streptomyces griseus44 interleukin 8-like protein
1hum [Bbk|BNL|ExP|Waw|Hal] 1 A 69 A macrophage inflammatory protein 1 beta Homo sapiens 1il8 [Bbk|BNL|ExP|Waw|Hal] 2 A 72 A interleukin 8 Homo sapiens 1mgs [Bbk|BNL|ExP|Waw|Hal] 1 A 73 A melanoma growth stimulating activity Homo sapiens 1plf [Bbk|BNL|ExP|Waw|Hal] 23 A 85 A platelet factor 4 Bos taurus 2.20 20.9045 histidine carrier protein
1hid [Bbk|BNL|ExP|Waw|Hal] 2 88 histidine containing carrier protein Bacillus subtilis 1ptf [Bbk|BNL|ExP|Waw|Hal] 1 87 histidine containing carrier protein Streptomyces faecalis 1.60 15.646 ribonuclease - bacterial
1fus [Bbk|BNL|ExP|Waw|Hal] 2 107 ribonucelase F1 Fusarium moniliforme 1.30 18.70 1rds [Bbk|BNL|ExP|Waw|Hal] 1 105 ribonuclease MS Aspergillus saitoi 1.80 20.4 1rnt [Bbk|BNL|ExP|Waw|Hal] 1 104 ribonuclease T1 Aspergillus oryzae 2.90 18.0047 SH2 domain
1ab2 [Bbk|BNL|ExP|Waw|Hal] 1 109 proto-oncogene Abelson SH2 domain Homo sapiens 1shb [Bbk|BNL|ExP|Waw|Hal] 2 A 104 A V-src tyrosin kinase SH2 domain Rous sarcoma virus 2.00 19.0048 FK506-binding protein
1fkb [Bbk|BNL|ExP|Waw|Hal] 1 107 FK506-binding protein Homo sapiens 1.70 16.50 1yat [Bbk|BNL|ExP|Waw|Hal] -5 107 12KDa FK506-binding protein Saccharomyces cerevisiae 2.50 17.7049 C-type lectin
1esl [Bbk|BNL|ExP|Waw|Hal] 1 120 lec domain E-selectin Homo sapiens 2.00 16.40 1msb [Bbk|BNL|ExP|Waw|Hal] 107 A 221 A mannose-binding protein Rattus rattus 2.30 17.6050 ribonuclease - mammalian
1rbb [Bbk|BNL|ExP|Waw|Hal] 1 A 124 A ribonuclease B Bos taurus 2.50 21.8 1bsr [Bbk|BNL|ExP|Waw|Hal] 1 A 124 A seminal ribonuclease Bos taurus 1.90 17.751 lysozyme
1ghl [Bbk|BNL|ExP|Waw|Hal] 0 A 129 A lysozyme Phasianus colchicus 2.10 17.80 1hhl [Bbk|BNL|ExP|Waw|Hal] 1 129 lyszoyme Numida meleagris 1.90 17.0 1lzt [Bbk|BNL|ExP|Waw|Hal] 1 129 lysozyme Gallus gallus 2.00 25.40 1lz3 [Bbk|BNL|ExP|Waw|Hal] 1 129 lysozyme Meleagris gallopavo 1.50 18.40 1lz1 [Bbk|BNL|ExP|Waw|Hal] 1 130 lysozyme Homo sapiens 1.50 18.70 1alc [Bbk|BNL|ExP|Waw|Hal] 1 122 alpha-lactalbumin Papio cynocephalus 1.70 22.0052 ribonuclease H
1rnh [Bbk|BNL|ExP|Waw|Hal] 2 152 ribonuclease H Escherichia coli 2.00 19.80 1ril [Bbk|BNL|ExP|Waw|Hal] 2 147 ribonuclease H Thermus thermophilus 2.80 20.50 1hrh [Bbk|BNL|ExP|Waw|Hal] 427 A 556 A ribonuclease H HIV-1 2.40 20.0053 histocompatibility antigen-binding domain
2hla [Bbk|BNL|ExP|Waw|Hal] 1 A 178 A histocompatibility antigen AW68.1 Homo sapiens 2.60 17.30 3hla [Bbk|BNL|ExP|Waw|Hal] 1 A 178 A histocompatibility antigen AW2.1 Homo sapiens 2.60 16.90 1hsa [Bbk|BNL|ExP|Waw|Hal] 1 A 178 A histocompatibility antigen HLA-B*2705 Homo sapiens 2.10 20.30 1vab [Bbk|BNL|ExP|Waw|Hal] 1 A 178 A histocompatibility antigen H-2KB Mus musculus 2.50 15.90 1hoc [Bbk|BNL|ExP|Waw|Hal] 1 A 178 A histocompatibility antigen H-2DB Mus musculus 2.40 19.8054 cysteine proteinase
9pap [Bbk|BNL|ExP|Waw|Hal] 1 212 papain Carica papaya 1.60 16.10 2act [Bbk|BNL|ExP|Waw|Hal] 1 218 actinidin Actinida chinensis 1.70 16.50 1ppo [Bbk|BNL|ExP|Waw|Hal] 1 216 papaya proteinase Carica papaya 1.80 15.5055 carbonic anhydrase
1ca2 [Bbk|BNL|ExP|Waw|Hal] 4 260 carbonic anhydrase II Homo sapiens 2.00 17.30 2cab [Bbk|BNL|ExP|Waw|Hal] 5 260 carbonic anhydrase B Homo sapiens 2.00 19.3056 thymidylate synthase
1tis [Bbk|BNL|ExP|Waw|Hal] 1 286 thymidylate synthase Bacteriophage T4 3.10 19.90 3tms [Bbk|BNL|ExP|Waw|Hal] 1 264 thymidilate synthase Escherichia coli 2.10 22.00 4tms [Bbk|BNL|ExP|Waw|Hal] 1 316 thymidilate synthase Lactobacillus casei 2.40 19.3057 zinc metalloproteinase
3tln [Bbk|BNL|ExP|Waw|Hal] 1 316 thermolysin Bacillus thermoproteolyticus 1.60 21.30 1npc [Bbk|BNL|ExP|Waw|Hal] 1 317 neutral protease Bacillus cereus 2.00 17.50 1ezm [Bbk|BNL|ExP|Waw|Hal] 1 298 elastase Pseudomonas aeruginosa 1.50 18.0058 serine proteinase inhibitor - serpin-type
Xpai 19 397 plasminogen activator inhibitor type-1 Homo sapiens 2.60 19.80 1hle [Bbk|BNL|ExP|Waw|Hal] 23 A 391 B leukeocyte elastase inhibitor Equus caballus 1.95 17.6 1ova [Bbk|BNL|ExP|Waw|Hal] 24 A 391 A ovalbumin Gallus domesticus 2.00 16.90 9api [Bbk|BNL|ExP|Waw|Hal] 20 A 395 C alpha1-antitrypsin Homo sapiens 3.00 20.9059 amylase
1cdg [Bbk|BNL|ExP|Waw|Hal] 1 503 cyclodextrin glycosyltransferase Bacillus circulans 2.00 16.40 2aaa [Bbk|BNL|ExP|Waw|Hal] 1 476 alpha-amylase Aspergillus niger 2.10 16.90 6taa [Bbk|BNL|ExP|Waw|Hal] 1 476 alpha-amylase Aspergillus oryzae 2.10 19.80
alpha/beta
60 thioredoxin
1aaz [Bbk|BNL|ExP|Waw|Hal] 1 A 87 A glutaredoxin bacteriophage T4 2.00 21.00 1ego [Bbk|BNL|ExP|Waw|Hal] 1 85 glutaredoxin Escherichia coli 3trx [Bbk|BNL|ExP|Waw|Hal] 1 105 thioredoxin Homo sapiens 2trx [Bbk|BNL|ExP|Waw|Hal] 1 A 108 A thioredoxin Escherichia coli 1.70 16.5061 nucleotide diphosphate kinase
1ndp [Bbk|BNL|ExP|Waw|Hal] 2 A 153 A nucleotide diphosphate kinase Dictyostelium discoideum 2.20 19.30 1ndl [Bbk|BNL|ExP|Waw|Hal] 6 A 155 A nucleotide diphosphate kinase Drosophila melanogaster 2.40 16.7062 flavodoxin
3fxn [Bbk|BNL|ExP|Waw|Hal] 1 138 flavodoxin Clostridium sp. 1.90 21.40 1fx1 [Bbk|BNL|ExP|Waw|Hal] 2 148 flavodoxin Desulfovibrio vulgaris 2.00 1flv [Bbk|BNL|ExP|Waw|Hal] 2 169 flavodoxin Anabaena 7120 2.00 18.50 1ofv [Bbk|BNL|ExP|Waw|Hal] 1 169 flavodoxin Anacystis nidulans 1.70 19.00 2fcr [Bbk|BNL|ExP|Waw|Hal] 1 173 flavodoxin Chondrus crispus 1.80 16.8063 GTP-binding protein
1etu [Bbk|BNL|ExP|Waw|Hal] 5 200 Elongation facture Tu Escherichia coli 2.90 18.00 5p21 [Bbk|BNL|ExP|Waw|Hal] 1 166 Harvey-ras p21 Homo sapiens 1.40 19.6064 dihydrofolate reductase
3dfr [Bbk|BNL|ExP|Waw|Hal] 1 162 dihydrofolate reductase Lactobacillus casei 1.70 15.20 4dfr [Bbk|BNL|ExP|Waw|Hal] 1 A 159 A dihydrofolate reductase Escherichia coli 1.70 15.50 8dfr [Bbk|BNL|ExP|Waw|Hal] 1 186 dihydrofolate reductase Gallus gallus 1.70 18.80 1dhf [Bbk|BNL|ExP|Waw|Hal] 4 A 185 A dihydrofolate reductase Homo sapiens 2.30 17.6065 nucleotide kinase
1ake [Bbk|BNL|ExP|Waw|Hal] 1 A 214 A adenylate kinase Escherichia coli 1.90 19.60 1ak3 [Bbk|BNL|ExP|Waw|Hal] 5 A 218 A adenylate kinase isozyme 3 Bos taurus 1.90 28.40 3adk [Bbk|BNL|ExP|Waw|Hal] 1 194 adenylate kinase Sus scrofa 2.10 19.30 1gky [Bbk|BNL|ExP|Waw|Hal] 1 186 guanylate kinase Saccharomyces cerevisiae 2.00 17.3067 beta-lactamase
3blm [Bbk|BNL|ExP|Waw|Hal] 31 290 beta-lactamase Staphylococcus aureus 2.00 16.30 4blm [Bbk|BNL|ExP|Waw|Hal] 31 A 291 A beta-lactamase Bacillus licheniformis 2.00 16.0068 ricin-like protein
1fmp [Bbk|BNL|ExP|Waw|Hal] 1 267 ricin A-chain Ricinus communis 2.80 20.90 1paf [Bbk|BNL|ExP|Waw|Hal] 1 A 262 A pokeweed antiviral protein Phytolacca americana 2.50 17.0069 subtilase
Xesp 2 A 275 A esperase Bacillus lentus 1.80 1st3 [Bbk|BNL|ExP|Waw|Hal] 1 269 subtilisin BL Bacillus lentus 1.40 19.00 1sbt [Bbk|BNL|ExP|Waw|Hal] 1 275 subtilisin BPN Bacillus amyloliquefaciens 2.50 44.00 1mee [Bbk|BNL|ExP|Waw|Hal] 1 A 275 A mesentericopeptidase Bacillus mesentericus 2.00 15.10 1sbc [Bbk|BNL|ExP|Waw|Hal] 1 275 subtilisin Carlsberg Bacillus subtilis 2.50 20.60 1thm [Bbk|BNL|ExP|Waw|Hal] 1 279 thermitase Thermoactinomyces vulgaris 1.40 16.60 2prk [Bbk|BNL|ExP|Waw|Hal] 1 279 proteinase K Tritirachium album 1.50 16.7070 periplasmic binding protein - sugar
1abp [Bbk|BNL|ExP|Waw|Hal] 1 306 L-arabinose-binding protein Escherichia coli 2.40 2gbp [Bbk|BNL|ExP|Waw|Hal] 1 309 D-galactose/D-glucose-bind Escherichia coli 1.90 14.60 1dri [Bbk|BNL|ExP|Waw|Hal] 1 271 D-ribose binding protein Escherichia coli 1.70 18.5071 phosphofructokinase
1pfk [Bbk|BNL|ExP|Waw|Hal] 0 A 319 A phosphofructokinase Escherichia coli 2.40 16.50 4pfk [Bbk|BNL|ExP|Waw|Hal] 1 320 phosphofructokinase Bacillus stearothermophilus 2.40 16.9072 lactate/malate dehydrogenase
6ldh [Bbk|BNL|ExP|Waw|Hal] 1 329 lactate dehydrogenase Squalis acanthias 2.80 20.20 1lld [Bbk|BNL|ExP|Waw|Hal] 7 A 319 A lactate dehydrogenase Brevibacterium longum AM101-2 1.50 17.90 9ldb [Bbk|BNL|ExP|Waw|Hal] 1 A 331 A lactate dehydrogenase (A-type) Sus scrofa 2.20 22.00 5ldh [Bbk|BNL|ExP|Waw|Hal] 1 331 lactate dehydrogenase (B-type) Sus scrofa 2.70 16.60 1ldb [Bbk|BNL|ExP|Waw|Hal] 15 331 lactate dehydrogenase Bacillus stearothermophilus 2.80 28.60 2ldx [Bbk|BNL|ExP|Waw|Hal] 1 331 lactate dehydrogenase Mus musculus 3.00 25.60 1llc [Bbk|BNL|ExP|Waw|Hal] 13 334 lactate dehydrogenase Lactobacillus casei 3.00 37.40 4mdh [Bbk|BNL|ExP|Waw|Hal] 1 A 333 A malate dehydrogenase Sus scrofa 2.50 16.70 2cmd [Bbk|BNL|ExP|Waw|Hal] 1 312 malate dehydrogenase Escherichia coli 1.90 18.8073 glyceraldehyde phosphate dehydrogenase
3gpd [Bbk|BNL|ExP|Waw|Hal] 1 R 334 R D-glyceraldehyde-3-phosphate dehydrogenase Homo sapiens 3.50 33.00 1gpd [Bbk|BNL|ExP|Waw|Hal] 1 G 334 G D-glyceraldehyde-3-phosphate dehydrogenase Homarus americanus 2.90 18.50 1gga [Bbk|BNL|ExP|Waw|Hal] 1 O 358 O D-glyceraldehyde-3-phosphate dehydrogenase Trypanosoma brucei 3.20 17.60 1gd1 [Bbk|BNL|ExP|Waw|Hal] 0 O 333 O D-glyceraldehyde-3-phosphate dehydrogenase Bacillus stearothermophilus 1.80 17.7074 periplasmic binding protein - amino acid
2lbp [Bbk|BNL|ExP|Waw|Hal] 1 346 leucine binding protein Escherichia coli 2.40 21.30 2liv [Bbk|BNL|ExP|Waw|Hal] 1 344 Leu/Ile/Val binding protein Escherichia coli 2.40 17.9075 alcohol dehydrogenase
3hud [Bbk|BNL|ExP|Waw|Hal] 1 A 374 A alcohol dehydrogenase Homo sapiens 3.00 25.30 8adh [Bbk|BNL|ExP|Waw|Hal] 1 374 alcohol dehydrogenase Equus caballus 2.40 19.0076 actin/heat-shock cognate
1atn [Bbk|BNL|ExP|Waw|Hal] 1 A 372 A actin Oryctolagus cuniculus 2.80 21.00 Xhsc 3 384 heat-shock cognate Bos taurus 2.20 20.5077 isocitrate dehydrogenase
1ipd [Bbk|BNL|ExP|Waw|Hal] 1 345 3-isopropylmalate dehydrogenase Thermus thermophilus 2.20 18.50 3icd [Bbk|BNL|ExP|Waw|Hal] 3 416 isocitrate dehydrogenase Escherichia coli 2.50 18.0078 aspartate aminotransferase
3aat [Bbk|BNL|ExP|Waw|Hal] 5 409 aspartate aminotransferase Escherichia coli 2.80 21.50 1ama [Bbk|BNL|ExP|Waw|Hal] 3 410 aspartate aminotransferase Gallus gallus 2.30 15.9079 disulphide oxidoreductase
2tpr [Bbk|BNL|ExP|Waw|Hal] 1 A 482 A trypanothione reductase Crithidia fasciculata 2.40 18.00 3grs [Bbk|BNL|ExP|Waw|Hal] 18 478 glutathione reductase Homo sapiens 1.50 18.60 3lad [Bbk|BNL|ExP|Waw|Hal] 1 A 472 A lipoamide dehydrogenase Azotobacter vinelandii 2.20 19.80 1lpf [Bbk|BNL|ExP|Waw|Hal] 1 A 472 A lipoamide dehydrogenase Pseduomonas fluorescens 2.80 19.60 1npx [Bbk|BNL|ExP|Waw|Hal] 1 447 NADH peroxidase Streptococcus faecalis 2.20 17.7080 alpha/beta-hydrolase
1ace [Bbk|BNL|ExP|Waw|Hal] 4 534 acetylcholinesterase Torpedo californica 2.80 18.60 1thg [Bbk|BNL|ExP|Waw|Hal] 2 544 triacylglycerol hydrolase Geotrichum candidum 1.80 15.7081 cholesterol oxidase
1cox [Bbk|BNL|ExP|Waw|Hal] 5 506 cholesterol oxidase Brevibacterium oxidase 1.80 15.30 1gal [Bbk|BNL|ExP|Waw|Hal] 3 583 glucose oxidase Aspergillus niger 2.30 18.1082 haemocyanin
1hc1 [Bbk|BNL|ExP|Waw|Hal] 5 653 haemocyanin Panularus interruptus 3.20 20.10 1lla [Bbk|BNL|ExP|Waw|Hal] 2 628 haemocyanin Limulus polyphemus 2.20 17.40
alpha/beta-barrel
83 tryptophan biosynthesis enzyme
1pii [Bbk|BNL|ExP|Waw|Hal] 1 255 phosphoribosyl-anthranilate isomerase Escherichia coli 2.00 17.30 1pii [Bbk|BNL|ExP|Waw|Hal] 256 452 indoleglycerol-phosphate synthase Escherichia coli 2.00 17.3085 triose phosphate isomerase
1tim [Bbk|BNL|ExP|Waw|Hal] 1 A 248 A triose phosphate isomerase Gallus gallus 2.50 21.00 5tim [Bbk|BNL|ExP|Waw|Hal] 2 A 250 A triose phosphate isomerase Trypanosoma brucei brucei 1.83 18.80 1ypi [Bbk|BNL|ExP|Waw|Hal] 2 A 248 A triose phosphate isomerase Saccharomyces cerevisiae 1.90 21.00 1tre [Bbk|BNL|ExP|Waw|Hal] 3 A 257 A triose phosphate isomerase Escherichia coli 2.60 11.9086 aldose reductase
1ads [Bbk|BNL|ExP|Waw|Hal] 1 315 Aldose reductase Homo sapiens 1.60 20.0 1ral [Bbk|BNL|ExP|Waw|Hal] 1 308 3-alpha-hydroxysteroid dehydrogenase Rattus norvegicus 3.00 22.087 fructose-1,6-biphosphatase aldolase
1ald [Bbk|BNL|ExP|Waw|Hal] 1 363 aldolase A Homo sapiens 2.00 22.00 1fba [Bbk|BNL|ExP|Waw|Hal] 2 A 364 A fructose-1,6-biphosphatase aldolase Drosophila melanogaster 1.90 17.9088 flavin-binding beta-barrel
1gox [Bbk|BNL|ExP|Waw|Hal] 1 359 glycolate oxidase Spinacia oleracea 2.00 18.90 1fcb [Bbk|BNL|ExP|Waw|Hal] 93 A 511 A flavocytochrome b2 Saccharomyces cerevisiae 2.40 18.8089 xylose isomerase
4xia [Bbk|BNL|ExP|Waw|Hal] 2 A 394 A xylose isomerase Arthrobacter, strain B3728 2.30 15.60 6xia [Bbk|BNL|ExP|Waw|Hal] 1 387 xylose isomerase Streptomyces albus 1.60 14.10 1xim [Bbk|BNL|ExP|Waw|Hal] 3 A 394 A xylose isomerase Actinoplanes missouriensis 2.20 15.2090 ribulose-1,5-biphosphate carboxylase/oxygenase
4rub [Bbk|BNL|ExP|Waw|Hal] 1 S 472 B ribulose-1,5-biphosphate carboxylase/oxygenase Nicotiana tabacum 2.70 20.20 8rub [Bbk|BNL|ExP|Waw|Hal] 1 S 475 L ribulose-1,5-biphosphate carboxylase/oxygenase Spinacia oleracea 2.40 24.00 5rub [Bbk|BNL|ExP|Waw|Hal] 2 A 457 A ribulose-1,5-biphosphate carboxylase/oxygenase Rhodospirillum rubrum 1.70 18.00
All beta
91 immunoglobulin domain - C2 set
2cd4 [Bbk|BNL|ExP|Waw|Hal] 99 176 CD4 domain 2 Homo sapiens 2.40 22.20 1cid [Bbk|BNL|ExP|Waw|Hal] 106 177 CD4 domain 4 Rattus rattus 2.80 23.3092 immunoglobulin domain - C1 set - non constant immunoglobulin
3hla [Bbk|BNL|ExP|Waw|Hal] 1 B 99 B beta-2 microglobulin Homo sapiens 2.60 16.90 1vab [Bbk|BNL|ExP|Waw|Hal] 1 B 99 B beta-2 microglobulin Mus musculus 2.50 15.90 3hla [Bbk|BNL|ExP|Waw|Hal] 179 A 270 A alpha-1 domain class I MHC Homo sapiens 2.60 16.90 1hsa [Bbk|BNL|ExP|Waw|Hal] 179 A 276 A alpha-1 domain class I MHC Homo sapiens 2.10 20.30 1vab [Bbk|BNL|ExP|Waw|Hal] 179 A 274 A alpha-1 domain class I MHC Mus musculus 2.50 15.9093 immunoglobulin domain - C1 set - constant immunoglobulin
2hfl [Bbk|BNL|ExP|Waw|Hal] 122 H 213 H immunoglobulin FAB HyHEL-5 CH1 Mus musculus 2.50 24.50 4fab [Bbk|BNL|ExP|Waw|Hal] 124 H 216 H immunoglobulin FAB 4-4-20 Mus musculus 2.70 21.50 1mam [Bbk|BNL|ExP|Waw|Hal] 125 H 217 H immunoglobulin FAB YS-T9.1 Mus musculus 2.50 21.50 2fb4 [Bbk|BNL|ExP|Waw|Hal] 124 H 221 H immunoglobulin FAB KOL CH1 Homo sapiens 1.90 18.90 2fbj [Bbk|BNL|ExP|Waw|Hal] 124 H 220 H immunoglobulin FAB J539 CH1 Mus musculus 2.00 19.40 2fbj [Bbk|BNL|ExP|Waw|Hal] 112 L 213 L immunoglobulin FAB J539 CL1 Mus musculus 2.00 19.40 1dfb [Bbk|BNL|ExP|Waw|Hal] 111 L 212 L immunoglobulin FAB 3D6 CL1 Homo sapiens 2.70 17.70 2fb4 [Bbk|BNL|ExP|Waw|Hal] 115 L 214 L immunoglobulin FAB KOL CL1 Homo sapiens 1.90 18.90 1fc1 [Bbk|BNL|ExP|Waw|Hal] 238 A 341 A immunoglobulin FC CH2 Homo sapiens 2.90 22.00 1fc1 [Bbk|BNL|ExP|Waw|Hal] 346 A 443 A immunoglobulin FC CH3 Homo sapiens 2.90 22.00 1pfc [Bbk|BNL|ExP|Waw|Hal] 346 446 immunoglobulin FC CH2 Cavia porcellus 3.10 30.3094 retroviral proteinase
3phv [Bbk|BNL|ExP|Waw|Hal] 1 99 HIV-1 proteinase HIV-1 2.30 18.90 1ivp [Bbk|BNL|ExP|Waw|Hal] 1 A 99 A HIV-2 proteinase HIV-2 2.50 19.70 2rsp [Bbk|BNL|ExP|Waw|Hal] 1 A 124 A Rous sarcoma proteinase Rous sarcoma virus 2.00 19.0095 immunoglobulin domain - V set - non variable immunoglobulin
1cd8 [Bbk|BNL|ExP|Waw|Hal] 1 114 CD8 Homo sapiens 2.60 19.20 2cd4 [Bbk|BNL|ExP|Waw|Hal] 1 98 CD4 domain 1 Homo sapiens 2.40 22.20 1cid [Bbk|BNL|ExP|Waw|Hal] 1 105 CD4 domain 3 Rattus rattus 2.80 23.30 1cdb [Bbk|BNL|ExP|Waw|Hal] 1 105 CD2 domain 1 Homo sapiens96 azurin/plastocyanin
2aza [Bbk|BNL|ExP|Waw|Hal] 1 A 129 A azurin Alcaligenes denitrificans 2.50 15.70 1azu [Bbk|BNL|ExP|Waw|Hal] 3 128 azurin Pseudomonas aeruginosa 2.70 35.00 1pcy [Bbk|BNL|ExP|Waw|Hal] 1 99 plastocyanin Populus nigra Italica 1.60 17.00 2plt [Bbk|BNL|ExP|Waw|Hal] 0 99 plastocyanin Chlamydomonas reinhardtii 1.50 16.8 9pcy [Bbk|BNL|ExP|Waw|Hal] 1 99 plastocyanin Phaseolus vulgaris 7pcy [Bbk|BNL|ExP|Waw|Hal] 0 99 plastocyanin Enteromorpha prolifera 1.80 11.70 1paz [Bbk|BNL|ExP|Waw|Hal] 1 120 pseudoazurin Alcaligenes faecalis 1.50 15.90 1mda [Bbk|BNL|ExP|Waw|Hal] 3 E 105 E amicyanin Paracoccus denitrificans 2.50 35.6097 antibacterial protein
2mcm [Bbk|BNL|ExP|Waw|Hal] 1 112 macromycin Streptomyces macromomyceticus 1.50 16.20 1noa [Bbk|BNL|ExP|Waw|Hal] 1 113 neocarzostatin Streptomyces carzinostaticus 1.50 17.20 1acx [Bbk|BNL|ExP|Waw|Hal] 1 107 actinoxanthin Actinomyces globisporus 2.0098 immunoglobulin domain - V set - immunoglobulin light chain
1hil [Bbk|BNL|ExP|Waw|Hal] 1 A 112 A immunoglobulin FAB 17/9 Mus musculus 2.00 19.00 1bbd [Bbk|BNL|ExP|Waw|Hal] 1 L 118 L immunoglobulin FAB 8F5 Mus musculus 2.80 19.00 1mcp [Bbk|BNL|ExP|Waw|Hal] 1 L 118 L immunoglobulin FAB McPC603 Mus musculus 2.70 22.50 1nca [Bbk|BNL|ExP|Waw|Hal] 1 L 112 L immunoglobulin FAB NC41 Mus musculus 2.50 19.10 1igf [Bbk|BNL|ExP|Waw|Hal] 1 L 112 L immunoglobulin FAB B13I2 Mus musculus 2.80 18.10 4fab [Bbk|BNL|ExP|Waw|Hal] 1 L 117 L immunoglobulin FAB 4-4-20 Mus musculus 2.70 21.50 1mam [Bbk|BNL|ExP|Waw|Hal] 1 L 112 L immunoglobulin FAB YS-T9.1 Mus musculus 2.50 21.50 1igm [Bbk|BNL|ExP|Waw|Hal] 1 L 112 L immunoglobulin FAB POT Homo sapiens 2.30 20.10 6fab [Bbk|BNL|ExP|Waw|Hal] 1 L 112 L immunoglobulin FAB 36-71 Mus musculus 1.90 20.90 1rei [Bbk|BNL|ExP|Waw|Hal] 1 A 107 A immunoglobulin Bence-Jones REI Homo sapiens 2.00 23.00 1dfb [Bbk|BNL|ExP|Waw|Hal] 1 L 110 L immunoglobulin FAB 3D6 Homo sapiens 2.70 17.70 1fdl [Bbk|BNL|ExP|Waw|Hal] 1 L 112 L immunoglobulin FAB D1.3 Mus musculus 2.50 18.40 3hfm [Bbk|BNL|ExP|Waw|Hal] 1 L 112 L immunoglobulin FAB HyHEL-10 Homo sapiens 3.00 24.60 1baf [Bbk|BNL|ExP|Waw|Hal] 1 L 112 L immunoglobulin FAB AN02 Mus musculus 2.90 19.50 2hfl [Bbk|BNL|ExP|Waw|Hal] 1 L 110 L immunoglobulin FAB HyHEL-5 Mus musculus 2.50 24.50 1jhl [Bbk|BNL|ExP|Waw|Hal] 1 L 108 L immunoglobulin FAB D11.15 Mus musculus 2.40 21.40 2fbj [Bbk|BNL|ExP|Waw|Hal] 1 L 111 L immunoglobulin FAB J539 Mus musculus 2.00 19.40 1bjl [Bbk|BNL|ExP|Waw|Hal] 2 1 117 1 immunoglobulin Bence-Jones loc Homo sapiens 3.00 19.40 2fb4 [Bbk|BNL|ExP|Waw|Hal] 1 L 114 L immunoglobulin FAB KOL Homo sapiens 1.90 18.90 2rhe [Bbk|BNL|ExP|Waw|Hal] 1 114 immunoglobulin Bence-Jones RHE Homo sapiens 1.60 14.90 2mcg [Bbk|BNL|ExP|Waw|Hal] 2 1 116 1 immunoglobulin Bence-Jones MCG Homo sapiens 2.00 18.70 7fab [Bbk|BNL|ExP|Waw|Hal] 1 L 108 L immunoglobulin FAB NEW Homo sapiens 2.00 16.90 8fab [Bbk|BNL|ExP|Waw|Hal] 3 A 112 A immunoglobulin FAB HIL Homo sapiens 1.80 17.3099 avidin
1pts [Bbk|BNL|ExP|Waw|Hal] 13 A 133 A streptavidin Streptomyces avidinii 2.00 17.90 2avi [Bbk|BNL|ExP|Waw|Hal] 3 A 123 A avidin Gallus gallus 3.00 15.10100 immunoglobulin domain - V set - immunoglobulin heavy chain
1igm [Bbk|BNL|ExP|Waw|Hal] 1 H 129 H immunoglobulin FAB POT Homo sapiens 2.30 20.10 1baf [Bbk|BNL|ExP|Waw|Hal] 1 H 120 H immunoglobulin FAB AN02 Mus musculus 2.90 19.50 3hfm [Bbk|BNL|ExP|Waw|Hal] 1 H 118 H immunoglobulin FAB HyHEL-10 Homo sapiens 3.00 24.60 7fab [Bbk|BNL|ExP|Waw|Hal] 1 H 122 H immunoglobulin FAB NEW Homo sapiens 2.00 16.90 1fai [Bbk|BNL|ExP|Waw|Hal] 1 H 129 H immunoglobulin FAB R19.9 Mus musculus 2.70 18.90 1jhl [Bbk|BNL|ExP|Waw|Hal] 1 H 116 H immunoglobulin DAB D11.15 Mus musculus 2.40 21.40 1fdl [Bbk|BNL|ExP|Waw|Hal] 1 H 121 H immunoglobulin FAB D1.3 Mus musculus 2.50 18.40 1igf [Bbk|BNL|ExP|Waw|Hal] 1 H 118 H immunoglobulin FAB B13I2 Mus musculus 2.80 18.10 1hil [Bbk|BNL|ExP|Waw|Hal] 1 B 118 B immunoglobulin FAB 17/9 Mus musculus 2.00 19.00 2fbj [Bbk|BNL|ExP|Waw|Hal] 1 H 123 H immunoglobulin FAB J539 Mus musculus 2.00 19.40 1mcp [Bbk|BNL|ExP|Waw|Hal] 1 H 127 H immunoglobulin FAB McPC603 Mus musculus 2.70 22.50 1mam [Bbk|BNL|ExP|Waw|Hal] 1 H 124 H immunoglobulin FAB YS-T9.1 Mus musculus 2.50 21.50 4fab [Bbk|BNL|ExP|Waw|Hal] 1 H 123 H immunoglobulin FAB 4-4-20 Mus musculus 2.70 21.50 1dfb [Bbk|BNL|ExP|Waw|Hal] 1 H 131 H immunoglobulin FAB 3D6 Homo sapiens 2.70 17.70 2fb4 [Bbk|BNL|ExP|Waw|Hal] 1 H 118 H immunoglobulin FAB KOL Homo sapiens 1.90 18.90 8fab [Bbk|BNL|ExP|Waw|Hal] 1 B 126 B immunoglobulin FAB HIL Homo sapiens 1.80 17.30 1bbd [Bbk|BNL|ExP|Waw|Hal] 1 H 123 H immunoglobulin FAB 8F5 Mus musculus 2.80 19.00 2hfl [Bbk|BNL|ExP|Waw|Hal] 2 H 116 H immunoglobulin FAB HyHEL-5 Mus musculus 2.50 24.50 6fab [Bbk|BNL|ExP|Waw|Hal] 1 H 126 H immunoglobulin FAB 36-71 Mus musculus 1.90 20.90 1nca [Bbk|BNL|ExP|Waw|Hal] 1 H 118 H immunoglobulin FAB NC41 Mus musculus 2.50 19.10101 interleukin 1-beta-like growth factor
1i1b [Bbk|BNL|ExP|Waw|Hal] 3 153 interleukin 1beta Homo sapiens 2.00 18.90 1mib [Bbk|BNL|ExP|Waw|Hal] 3 152 interleukin 1beta Mus musculus 2.80 19.20 2fgf [Bbk|BNL|ExP|Waw|Hal] 19 144 basic fibroblast growth factor Homo sapiens 1.80 18.60 1bar [Bbk|BNL|ExP|Waw|Hal] 1 B 138 B acidic fibroblast growth factor Homo sapiens 2.70 17.70102 lipocalin
1mup [Bbk|BNL|ExP|Waw|Hal] 5 161 major urinary protein Mus musculus 2.40 19.10 1rbp [Bbk|BNL|ExP|Waw|Hal] 1 174 retinol-binding protein Homo sapiens 2.00 18.10 1bbp [Bbk|BNL|ExP|Waw|Hal] 2 A 178 A bilin-binding protein Pieris brassicae 2.00 20.00 1ifb [Bbk|BNL|ExP|Waw|Hal] 1 131 intestinal fatty acid-binding protein Rattus rattus 2.00 18.80 1alb [Bbk|BNL|ExP|Waw|Hal] 1 131 adipocyte lipid-binding protein Mus musculus 2.50 18.30 1mdc [Bbk|BNL|ExP|Waw|Hal] 1 131 fatty acid-binding protein Manduca sexta 1.80 17.30 2hmb [Bbk|BNL|ExP|Waw|Hal] 1 131 muscle fatty acid binding protein Homo sapiens 2.10 19.50 1opa [Bbk|BNL|ExP|Waw|Hal] 1 A 133 A retinol binding protein II Rattus rattus 1.90 20.00103 Cu/Zn superoxide dismutase
1srd [Bbk|BNL|ExP|Waw|Hal] 1 A 154 A superoxide dismutase Spinacea oleracea 2.00 24.90 1sdy [Bbk|BNL|ExP|Waw|Hal] 2 A 151 A superoxide dimutase Saccharomyces cerevisiae 2.50 15.80 2sod [Bbk|BNL|ExP|Waw|Hal] 1 O 151 O superoxide dismutase Bos taurus 2.00 25.60104 glucose permease
1f3g [Bbk|BNL|ExP|Waw|Hal] 19 168 phosphocarrier III glc Escherichia coli 2.10 16.20 1gpr [Bbk|BNL|ExP|Waw|Hal] 4 161 glucose permease (domain IIA) Bacillus subtilis 1.90 15.60105 crystallin
4gcr [Bbk|BNL|ExP|Waw|Hal] 1 174 gamma-II crystallinBos taurus 1.50 18.10 3gcr [Bbk|BNL|ExP|Waw|Hal] 1 A 173 A gamma-IIIB crystallinBos taurus 2.50 26.00 2gcr [Bbk|BNL|ExP|Waw|Hal] 1 174 gamma-IV crystallinBos taurus 2.30 14.30 2bb2 [Bbk|BNL|ExP|Waw|Hal] -2 175 beta-B2 crystallinBos taurus 2.10 18.60 1prs [Bbk|BNL|ExP|Waw|Hal] spore coat protein S106 plant virus coat protein
2tbv [Bbk|BNL|ExP|Waw|Hal] 102 A 273 A coat protein Tomato bushy stunt virus 2.90 4sbv [Bbk|BNL|ExP|Waw|Hal] 62 A 260 A coat protein Southern bean mosaic virus 2.80 25.40107 serine proteinase - bacterial
2alp [Bbk|BNL|ExP|Waw|Hal] 15A 245 alpha-lytic proteinase Lysobacter enzymogenes 1.70 13.10 2sga [Bbk|BNL|ExP|Waw|Hal] 16 242 proteinase A Streptomyces griseus 1.50 12.60 3sgb [Bbk|BNL|ExP|Waw|Hal] 16 E 242 E proteinase B Streptomyces griseus 1.80 12.50108 plant lectin
2ltn [Bbk|BNL|ExP|Waw|Hal] 1 A 47 B lectin Pisum sativum 1.70 17.70 1loe [Bbk|BNL|ExP|Waw|Hal] 1 A 47 B lectin Lathyrus achrus 1.90 18.50 1lte [Bbk|BNL|ExP|Waw|Hal] 1 239 lectin Erythrina corallodendron 2.00 19.00 1lec [Bbk|BNL|ExP|Waw|Hal] 2 243 lectin Griffonia simplifocolia 2.00 18.20 4cna [Bbk|BNL|ExP|Waw|Hal] 119 A 118 B concanavalin A Canavalia ensiformis 2.90 19.00109 serine proteinase - mammalian
1hne [Bbk|BNL|ExP|Waw|Hal] 16 E 243 E neutrophil elastase Homo sapiens 1.80 16.40 3est [Bbk|BNL|ExP|Waw|Hal] 16 245 pancreatic elastase Sus scrofa 1.60 16.90 1tbs [Bbk|BNL|ExP|Waw|Hal] 16 243 trypsin Salmo salar 1.80 16.40 2ptn [Bbk|BNL|ExP|Waw|Hal] 16 245 trypsin Bos taurus 1.50 19.30 1trm [Bbk|BNL|ExP|Waw|Hal] 16 A 245 A trypsin Rattus rattus 2.30 16.00 2gch [Bbk|BNL|ExP|Waw|Hal] 1 245 gamma-chymotrypsin Bos taurus 1.70 18.10 2pka [Bbk|BNL|ExP|Waw|Hal] 16 A 246 B kallikrein A Sus scrofa 2.00 22.00 1ton [Bbk|BNL|ExP|Waw|Hal] 16 246 tonin Rattus rattus 1.80 19.60 1ppb [Bbk|BNL|ExP|Waw|Hal] 1H L 247 H thrombin Homo sapiens 1.90 15.60 1bbr [Bbk|BNL|ExP|Waw|Hal] 1H L 247 E thrombin Bos taurus 2.30 16.70 3rp2 [Bbk|BNL|ExP|Waw|Hal] 16 A 243 A mast-cell proteinase II Rattus rattus 1.90 19.10 1sgt [Bbk|BNL|ExP|Waw|Hal] 16 245 trypsin Streptomyces griseus 1.70 16.10110 aspartic proteinase
Xypa -1 326 proteinase A Saccharomyces cerevisiae 2.50 21.00 Xren -2 A 326 A renin Mus musculus 1.80 19.60 1bbs [Bbk|BNL|ExP|Waw|Hal] -1 326 renin Homo sapiens 2.80 19.60 1lya [Bbk|BNL|ExP|Waw|Hal] 1 A 346 B cathepsin D Homo sapiens 2.50 18.80 5pep [Bbk|BNL|ExP|Waw|Hal] 1 327 pepsin Sus scrofa 2.30 18.00 4cms [Bbk|BNL|ExP|Waw|Hal] -2 326 chymosin Bos taurus 2.20 15.80 1mpp [Bbk|BNL|ExP|Waw|Hal] -1 332 pepsin Mucor pusillus 2.10 16.20 4ape [Bbk|BNL|ExP|Waw|Hal] -2 326 endothiapepsin Endothia parasitica 2.10 17.80 3app [Bbk|BNL|ExP|Waw|Hal] 1 323 penicillopepsin Penicillium janthinellum 1.80 13.60 2apr [Bbk|BNL|ExP|Waw|Hal] 1 325 rhizopuspepsin Rhizopus chinensis 1.80 14.30111 neuraminidase
1nsb [Bbk|BNL|ExP|Waw|Hal] 76 A 465 A neuraminidase Influenza virus B/Beijing 2.20 14.80 1nca [Bbk|BNL|ExP|Waw|Hal] 81 N 468 N neuraminidase Influenza virus A/Tern/G70C 2.50 19.10 2bat [Bbk|BNL|ExP|Waw|Hal] 82 469 neuraminidase N2 Influenza virus A/Tokyo 2.00 21.00112 picornavirus coat proteins
4rhv [Bbk|BNL|ExP|Waw|Hal] 17 1 68 4 Coat proteins VP1, VP2, VP3 and VP4 rhinovirus serotype 14 3.00 16.00 1r1a [Bbk|BNL|ExP|Waw|Hal] 5 1 44 4 Coat proteins VP1, VP2, VP3 and VP4 rhinovirus serotype 1 3.20 29.30 2plv [Bbk|BNL|ExP|Waw|Hal] 6 1 69 4 Coat proteins VP1, VP2, VP3 and VP4 polio virus 2.90 20.00 2mev [Bbk|BNL|ExP|Waw|Hal] 1 1 70 4 Coat proteins VP1, VP2, VP3 and VP4 mengo virus 3.00 22.10 1tme [Bbk|BNL|ExP|Waw|Hal] 1 1 39 4 Coat proteins VP1, VP2, VP3 and VP4 murine encephalomyelitis virus 2.80 30.00 1bbt [Bbk|BNL|ExP|Waw|Hal] 1 1 85 4 Coat proteins VP1, VP2, VP3 and VP4 foot and mouth disease virus 2.60 19.20Membrane-bound all-beta
113 porin
1pho [Bbk|BNL|ExP|Waw|Hal] 1 340 phosphoporin (phoe) Escherichia coli 3.00 22.2 1omf [Bbk|BNL|ExP|Waw|Hal] 1 340 matrix porin (ompf) Escherichia coli 2.40 20.80
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Last updated 7th April '97
Section 10 Index
Index to Course Material