Re: What is criteria of our Protein

peter Murray-rust (ubcg09q@iona.cryst.bbk.ac.uk)
Sun, 19 Feb 1995 00:37:03 +0000 (GMT)

Peter Murray-Rust, Glaxo Research & Dev. (pmr1716@ggr.co.uk); (BioMOO: PeterMR)
Birkbeck College, ubcg09q@cryst.bbk.ac.uk, CBMT/Daresbury mbglx@seqnet.dl.ac.uk
http://www.cryst.bbk.ac.uk/PPS/index.html, http://www.dl.ac.uk/CBMT/HOME.html



This is a beautiful idea, Dawei. The course is run *by the members* *for
the members* and Alan and I and the others are here to help. Within
limits, you can do anything that seems reasonable. I hope that other
members read this , and if they think it is a good idea, I'm sure they
will contact you.

On Sat, 18 Feb 1995, Lin Dawei wrote:

My question is that do you have a criteria to choose
> the proteins. Such as resolution, homology, fold, function etc. If so,
Alan did this! I don't think there was anything special - he
just chose 250 proteins! (BTW - if anyone has a protein without
coordinates or broken in some major way, we'll give you a new one!)

> can we build other kind of discussion groups, like alpha-fold protein
> group, alpha/beta fold protein group, etc. I think this not only can let
This is a nice idea. I suggest we wait a little while until
people are familiar with the MOO and their groups (some people have only
just found their group). I think a really nive idea would be to build a
hierarchy of rooms based on a classification like this.!

> Another suggestion is that because all student have been already
> assigned a group and a protein. Could we add the pdb ident number after
> our name at the end of our email. So we know both the real name and
> protein name. Is this interesting? :-)
This is a very nice idea. You can then find who you are
homologous to!
BTW WE ARE INTENDING TO USE THE 4-LETTER CODES FOR COURSE ADMIN.
I SHALL SHORTLY POST A FEEDBACK FORM WHERE COURSE MEMBERS CAN TELL US HOW
THEY HAVE BEEN GETTING ON. THE UNIQUE ID WILL BE THE PROTEIN CODE, SO
PLEASE DON'T CHANGE IT!!! Also, we may suggest you use them as
verification codes against your e-mails.

P.