PPS 96 Term 3
Project
4-Helical
Bundle Protein -
Cytokines
Kingman
Ng
October 25, 1996.
CONTENTS
-
Introduction
-
Cytokines
-
Short Chain 4 Helical Bundle Subfamily
-
Interleukin 4 (IL-4)
-
Interleukin 2 (IL-2)
-
Granulocyte Macrophage Colony Stimulating Factor
(GMCSF)
-
Primary Structure Comparisons
-
Statistical Analysis of Protein Sequences
-
Summary of Amino Acid Composition Analysis
-
Sequence Alignment
-
Secondary Structure Comparisons
-
Secondary Structure Analysis using DSSP
-
Sequence Similarity Comparisons of All Secondary
Elements
-
Sequence Similarity Comparisons of Helical Residues
-
Tertiary Structure Comparisons
-
Overall Folds - 4 Helical Bundles
-
Ramachandran Plots of IL4, IL2 and GMCSF Structures
-
Protein Surface Properties
-
Loop Properties
-
Prolines of GMCSF
-
Solvent Accessibility and Structural Environment of "Conserved"
Residues